Data collection of malaria transmitting mosquitoes

Data collection of malaria transmitting mosquitoes

The original version of this document is located at at https://docs.qfield.org/success-stories/mosquito-malario-ground-truth-data-collection

Use of Qfield in the context of ground-truth data collection work of malaria transmitting mosquitoes

By Paul Taconet, GIS Engineer, French Research Institute for Sustainable Development (IRD) 11.12.2018

Goal and field constraints

For a research work aiming at improving the knowledge on the environment of the mosquitoes that transmit malaria, the French Research Institute for Sustainable Development needed to generate a land cover map of two rural areas in Africa, one in Burkina Faso and one in Ivory Coast. Two satellites images (Spot 6 at 1.5 meters spatial resolutions) are used as input of a supervised object-based image classification for this work. The supervised method implies the collection of ground truth parcels, i.e. location and geo-referencing of a set of parcels of each land cover class on the ground, preferably spread all over the study areas. Both areas are 50 km2 wide and their nature (savannahs and rural areas, where roads are mainly narrow clay tracks) imply to move around in motorbike or by feet. In addition, one could quickly get lost in the rural labyrinth tracks in absence of a map. We hence needed light and very portable equipment, as well as a way to easily explore the area without getting lost.

Project preparation

We created a QGIS project with the Spot image and a layer to collect the ground data. We first converted our Spot image to a Geopackage raster, and built pyramids so as to get quick rendering in QField. The whole image (50 km2 at 1.5 m spatial resolution with 3 bands) weighted approximately 800 MB, which enabled us to load it in our tablet without the need to add any extra memory.

We created a vector layer to draw our ground truth parcels (i.e. polygons of land cover parcels). It contained a field to identify the land cover type, some fields to take pictures and a field for eventual additional notes.

We then uploaded the project in QField in our tablet.

Field work

On the field, we were able to move around easily in motorbike without getting lost, thanks to our location displayed on QField with the satellite image as background. When a parcel of interest was identified, we were able to draw its perimeter in QField and very easily fill-in the proper information on the attribute table (land cover type, pictures). When hesitating on the land cover type to attribute to a given parcel, we were able, in "live" (i.e. on the ground), to quickly look at previously retrieved parcels and compare them to the parcel of interest (with the pictures and the satellite image).

We were able, without any extra effort at the end each field working day, to see the progress of the work: which pieces of our study area we had covered, which remained to explore, how many parcels we had got for each land cover class and how many remained to retrieve. This is very appreciable in such conditions, where work can be testing and nights can be shorts. Back in office, we did not have to realize fastidious and time-consuming work such as digitalizing the parcels from a traditional GPS point layer, linking the pictures to our land cover layer, etc., which traditionally took days of work.

!3 land cover parcels that were digitalized on the ground

!

!Digitalizing a new parcel and filling the attribute table

!On the field work using Qfield

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